BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034G11SP1|AL429957
(665 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1247 0.0
>3x_Contig1619
Length = 7770
Score = 1247 bits (626), Expect = 0.0
Identities = 656/665 (98%), Gaps = 3/665 (0%)
Strand = Plus / Minus
Query: 1 atactttctgtatcttccccctcgcggcatcatccaaccgtacggttg-atgatgccgcg 59
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 2768 atactttctgtatcttccccctcgcggcatcatccaaccgtacggttggatga-gccgcg 2710
Query: 60 aggggcttctataattatattcatgaggtttagatggatcataaattggtttcatagata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2709 aggggcttctataattatattcatgaggtttagatggatcataaattggtttcatagata 2650
Query: 120 atacttctaaaataaaatctaatggtactaattcattcttttgaaaatatctattagaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2649 atacttctaaaataaaatctaatggtactaattcattcttttgaaaatatctattagaat 2590
Query: 180 taatacaccccgcggctcctcccttcggggggagtccgcggggaaagatctaaatttatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2589 taatacaccccgcggctcctcccttcggggggagtccgcggggaaagatctaaatttatc 2530
Query: 240 ttccccccgcggcatcacccaaccctagggttgggtgagccgcggggggctaataataat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2529 ttccccccgcggcatcacccaaccctagggttgggtgagccgcggggggctaataataat 2470
Query: 300 tkaccctctaatgttttatgtaaaccatgttttataatgataatactagaaaatcacatt 359
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2469 tgaccctctaatgttttatgtaaaccatgttttataatgataatactagaaaatcacatt 2410
Query: 360 acaaaatcaatatattttctagtatataatccactatttaacatagttggaaatacttga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2409 acaaaatcaatatattttctagtatataatccactatttaacatagttggaaatacttga 2350
Query: 420 taatataatctatcagtactagaaatttaaaatctatatttatkactatcttccccgcgg 479
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2349 taatataatctatcagtactagaaatttaaaatctatatttattactatcttccccgcgg 2290
Query: 480 rctcctcccctttaaagggattaccaggggaggagccgcggggtttataaatntkattag 539
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 2289 actcctcccctttaaagggattaccaggggaggagccgcggggtttataaattttattag 2230
Query: 540 tagatttaggtaaatcatataataaactattatcaggagttcaatttaaaatagtatctt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2229 tagatttaggtaaatcatataataaactattatcaggagttcaatttaaaatagtatctt 2170
Query: 600 gaatagccttcattaaatcttccccgcggtctccccccgaagag-ggagccgcgggtgaa 658
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 2169 gaatagccttcattaaatcttccccgcggtctccccccgaagggaggagccgcgggtgaa 2110
Query: 659 tttat 663
|||||
Sbjct: 2109 tttat 2105
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4890
Number of Sequences: 1807
Number of extensions: 4890
Number of successful extensions: 164
Number of sequences better than 1.0e-20: 1
length of query: 665
length of database: 10,358,551
effective HSP length: 16
effective length of query: 649
effective length of database: 10,329,639
effective search space: 6703935711
effective search space used: 6703935711
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)